Experiment Analysis Settings Resource¶

Resource URL http://mytorrentserver/rundb/api/v1/experimentanalysissettings/
Schema URL http://mytorrentserver/rundb/api/v1/experimentanalysissettings/schema/

Resource Fields¶

field	help text	default	nullable	readonly	blank	unique	type
alignmentargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
analysisargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
barcodeKitName	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
barcodedSamples	Unicode string data. Ex: “Hello World”	{}	true	false	false	false	string
base_recalibration_mode	Unicode string data. Ex: “Hello World”	standard_recal	false	false	false	false	string
basecallerargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
beadfindargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
calibrateargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
custom_args	Boolean data. Ex: True	false	false	false	true	false	boolean
date	A date & time as a string. Ex: “2010-11-10T03:07:43”	n/a	true	false	false	false	datetime
endBarcodeKitName	Unicode string data. Ex: “Hello World”		true	false	false	false	string
experiment	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	true	false	related
hotSpotRegionBedFile	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
id	Integer data. Ex: 2673		false	false	true	true	integer
ionstatsargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
isDuplicateReads	Boolean data. Ex: True	false	false	false	true	false	boolean
isEditable	Boolean data. Ex: True	false	false	false	true	false	boolean
isOneTimeOverride	Boolean data. Ex: True	false	false	false	true	false	boolean
libraryKey	Unicode string data. Ex: “Hello World”		false	false	true	false	string
libraryKitBarcode	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
libraryKitName	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
mixedTypeRNA_hotSpotRegionBedFile	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
mixedTypeRNA_reference	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
mixedTypeRNA_targetRegionBedFile	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
prebasecallerargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
prethumbnailbasecallerargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
realign	Boolean data. Ex: True	false	false	false	true	false	boolean
reference	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
resource_uri	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string
results	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	true	false	true	false	related
selectedPlugins	Unicode string data. Ex: “Hello World”	{}	true	false	false	false	string
sseBedFile	Unicode string data. Ex: “Hello World”		true	false	false	false	string
status	Unicode string data. Ex: “Hello World”		false	false	true	false	string
targetRegionBedFile	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
tfKey	Unicode string data. Ex: “Hello World”		false	false	true	false	string
threePrimeAdapter	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
thumbnailalignmentargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
thumbnailanalysisargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
thumbnailbasecallerargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
thumbnailbeadfindargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
thumbnailcalibrateargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
thumbnailionstatsargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string

Example Response¶

{
    "meta": {
        "limit": 1,
        "next": "/rundb/api/v1/experimentanalysissettings/?offset=1&limit=1&format=json",
        "offset": 0,
        "previous": null,
        "total_count": 136
    },
    "objects": [
        {
            "alignmentargs": "",
            "analysisargs": "",
            "barcodeKitName": "Ion Dual Barcode Kit 1-96",
            "barcodedSamples": {},
            "base_recalibration_mode": "standard_recal",
            "basecallerargs": "",
            "beadfindargs": "",
            "calibrateargs": "",
            "custom_args": false,
            "date": "2019-10-03T20:53:08.000599+00:00",
            "endBarcodeKitName": "",
            "experiment": "/rundb/api/v1/experiment/163/",
            "hotSpotRegionBedFile": "",
            "id": 162,
            "ionstatsargs": "",
            "isDuplicateReads": false,
            "isEditable": true,
            "isOneTimeOverride": false,
            "libraryKey": "TCAG",
            "libraryKitBarcode": null,
            "libraryKitName": "Ion AmpliSeq Library Kit Plus",
            "mixedTypeRNA_hotSpotRegionBedFile": null,
            "mixedTypeRNA_reference": null,
            "mixedTypeRNA_targetRegionBedFile": null,
            "prebasecallerargs": "",
            "prethumbnailbasecallerargs": "",
            "realign": false,
            "reference": "",
            "resource_uri": "/rundb/api/v1/experimentanalysissettings/162/",
            "results": [],
            "selectedPlugins": {},
            "sseBedFile": "",
            "status": "inactive",
            "targetRegionBedFile": "",
            "tfKey": "ATCG",
            "threePrimeAdapter": "ATCACCGACTGCCCATAGAGAGGCTGAGAC",
            "thumbnailalignmentargs": "",
            "thumbnailanalysisargs": "",
            "thumbnailbasecallerargs": "",
            "thumbnailbeadfindargs": "",
            "thumbnailcalibrateargs": "",
            "thumbnailionstatsargs": ""
        }
    ]
}

Allowed list HTTP methods¶

GET
POST
PUT
DELETE
PATCH

Allowed detail HTTP methods¶

GET
POST
PUT
DELETE
PATCH