Experiment Analysis Settings Resource

Resource URL http://mytorrentserver/rundb/api/v1/experimentanalysissettings/
Schema URL http://mytorrentserver/rundb/api/v1/experimentanalysissettings/schema/

Resource Fields

field help text default nullable readonly blank unique type
alignmentargs Unicode string data. Ex: “Hello World”   false false true false string
analysisargs Unicode string data. Ex: “Hello World”   false false true false string
barcodeKitName Unicode string data. Ex: “Hello World” n/a true false false false string
barcodedSamples Unicode string data. Ex: “Hello World” {} true false false false string
base_recalibration_mode Unicode string data. Ex: “Hello World” standard_recal false false false false string
basecallerargs Unicode string data. Ex: “Hello World”   false false true false string
beadfindargs Unicode string data. Ex: “Hello World”   false false true false string
calibrateargs Unicode string data. Ex: “Hello World”   false false true false string
custom_args Boolean data. Ex: True false false false true false boolean
date A date & time as a string. Ex: “2010-11-10T03:07:43” n/a true false false false datetime
endBarcodeKitName Unicode string data. Ex: “Hello World”   true false false false string
experiment A single related resource. Can be either a URI or set of nested resource data. n/a true false true false related
hotSpotRegionBedFile Unicode string data. Ex: “Hello World” n/a true false false false string
id Integer data. Ex: 2673   false false true true integer
ionstatsargs Unicode string data. Ex: “Hello World”   false false true false string
isDuplicateReads Boolean data. Ex: True false false false true false boolean
isEditable Boolean data. Ex: True false false false true false boolean
isOneTimeOverride Boolean data. Ex: True false false false true false boolean
libraryKey Unicode string data. Ex: “Hello World”   false false true false string
libraryKitBarcode Unicode string data. Ex: “Hello World” n/a true false false false string
libraryKitName Unicode string data. Ex: “Hello World” n/a true false false false string
mixedTypeRNA_hotSpotRegionBedFile Unicode string data. Ex: “Hello World” n/a true false false false string
mixedTypeRNA_reference Unicode string data. Ex: “Hello World” n/a true false false false string
mixedTypeRNA_targetRegionBedFile Unicode string data. Ex: “Hello World” n/a true false false false string
prebasecallerargs Unicode string data. Ex: “Hello World”   false false true false string
prethumbnailbasecallerargs Unicode string data. Ex: “Hello World”   false false true false string
realign Boolean data. Ex: True false false false true false boolean
reference Unicode string data. Ex: “Hello World” n/a true false false false string
resource_uri Unicode string data. Ex: “Hello World” n/a false true false false string
results Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a true false true false related
selectedPlugins Unicode string data. Ex: “Hello World” {} true false false false string
sseBedFile Unicode string data. Ex: “Hello World”   true false false false string
status Unicode string data. Ex: “Hello World”   false false true false string
targetRegionBedFile Unicode string data. Ex: “Hello World” n/a true false false false string
tfKey Unicode string data. Ex: “Hello World”   false false true false string
threePrimeAdapter Unicode string data. Ex: “Hello World” n/a true false false false string
thumbnailalignmentargs Unicode string data. Ex: “Hello World”   false false true false string
thumbnailanalysisargs Unicode string data. Ex: “Hello World”   false false true false string
thumbnailbasecallerargs Unicode string data. Ex: “Hello World”   false false true false string
thumbnailbeadfindargs Unicode string data. Ex: “Hello World”   false false true false string
thumbnailcalibrateargs Unicode string data. Ex: “Hello World”   false false true false string
thumbnailionstatsargs Unicode string data. Ex: “Hello World”   false false true false string

Example Response

{
    "meta": {
        "limit": 1,
        "next": "/rundb/api/v1/experimentanalysissettings/?offset=1&limit=1&format=json",
        "offset": 0,
        "previous": null,
        "total_count": 136
    },
    "objects": [
        {
            "alignmentargs": "",
            "analysisargs": "",
            "barcodeKitName": "Ion Dual Barcode Kit 1-96",
            "barcodedSamples": {},
            "base_recalibration_mode": "standard_recal",
            "basecallerargs": "",
            "beadfindargs": "",
            "calibrateargs": "",
            "custom_args": false,
            "date": "2019-10-03T20:53:08.000599+00:00",
            "endBarcodeKitName": "",
            "experiment": "/rundb/api/v1/experiment/163/",
            "hotSpotRegionBedFile": "",
            "id": 162,
            "ionstatsargs": "",
            "isDuplicateReads": false,
            "isEditable": true,
            "isOneTimeOverride": false,
            "libraryKey": "TCAG",
            "libraryKitBarcode": null,
            "libraryKitName": "Ion AmpliSeq Library Kit Plus",
            "mixedTypeRNA_hotSpotRegionBedFile": null,
            "mixedTypeRNA_reference": null,
            "mixedTypeRNA_targetRegionBedFile": null,
            "prebasecallerargs": "",
            "prethumbnailbasecallerargs": "",
            "realign": false,
            "reference": "",
            "resource_uri": "/rundb/api/v1/experimentanalysissettings/162/",
            "results": [],
            "selectedPlugins": {},
            "sseBedFile": "",
            "status": "inactive",
            "targetRegionBedFile": "",
            "tfKey": "ATCG",
            "threePrimeAdapter": "ATCACCGACTGCCCATAGAGAGGCTGAGAC",
            "thumbnailalignmentargs": "",
            "thumbnailanalysisargs": "",
            "thumbnailbasecallerargs": "",
            "thumbnailbeadfindargs": "",
            "thumbnailcalibrateargs": "",
            "thumbnailionstatsargs": ""
        }
    ]
}

Allowed list HTTP methods

  • GET
  • POST
  • PUT
  • DELETE
  • PATCH

Allowed detail HTTP methods

  • GET
  • POST
  • PUT
  • DELETE
  • PATCH