Experiment Resource¶

Resource URL http://mytorrentserver/rundb/api/v1/experiment/
Schema URL http://mytorrentserver/rundb/api/v1/experiment/schema/

Resource Fields¶

field	help text	default	nullable	readonly	blank	unique	type
autoAnalyze	Boolean data. Ex: True	true	false	false	true	false	boolean
baselineRun	Boolean data. Ex: True	false	false	false	true	false	boolean
chefChipExpiration1	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefChipExpiration2	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefChipType1	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefChipType2	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefEndTime	A date & time as a string. Ex: “2010-11-10T03:07:43”	n/a	true	false	false	false	datetime
chefExtraInfo_1	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefExtraInfo_2	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefFlexibleWorkflow	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefInstrumentName	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefKitType	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefLastUpdate	A date & time as a string. Ex: “2010-11-10T03:07:43”	n/a	true	false	false	false	datetime
chefLogPath	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
chefLotNumber	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefManufactureDate	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefMessage	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefOperationMode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefPackageVer	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefProgress	Floating point numeric data. Ex: 26.73	0	false	false	true	false	float
chefProtocolDeviationName	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
chefReagentID	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefReagentsExpiration	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefReagentsLot	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefReagentsPart	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefReagentsSerialNum	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefRemainingSeconds	Integer data. Ex: 2673	n/a	true	false	false	false	integer
chefSamplePos	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefScriptVersion	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefSolutionsExpiration	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefSolutionsLot	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefSolutionsPart	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefSolutionsSerialNum	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefStartTime	A date & time as a string. Ex: “2010-11-10T03:07:43”	n/a	true	false	false	false	datetime
chefStatus	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefTipRackBarcode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chipBarcode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chipType	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
cycles	Integer data. Ex: 2673	n/a	false	false	false	false	integer
date	A date & time as a string. Ex: “2010-11-10T03:07:43”	n/a	false	false	false	false	datetime
diskusage	Integer data. Ex: 2673	n/a	true	false	false	false	integer
displayName	Unicode string data. Ex: “Hello World”		false	false	false	false	string
eas_set	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	true	false	true	false	related
expCompInfo	Unicode string data. Ex: “Hello World”		false	false	true	false	string
expDir	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
expName	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
flows	Integer data. Ex: 2673	n/a	false	false	false	false	integer
flowsInOrder	Unicode string data. Ex: “Hello World”		false	false	true	false	string
ftpStatus	Unicode string data. Ex: “Hello World”		false	false	true	false	string
id	Integer data. Ex: 2673		false	false	true	true	integer
isProton	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string
isReverseRun	Boolean data. Ex: True	false	false	false	true	false	boolean
log	Unicode string data. Ex: “Hello World”	{}	false	false	true	false	string
metaData	Unicode string data. Ex: “Hello World”	{}	false	false	true	false	string
notes	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
pgmName	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
pinnedRepResult	Boolean data. Ex: True	false	false	false	true	false	boolean
plan	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	true	false	related
platform	Unicode string data. Ex: “Hello World”		false	false	true	false	string
rawdatastyle	Unicode string data. Ex: “Hello World”	single	true	false	false	false	string
reagentBarcode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
resource_uri	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string
resultDate	A date & time as a string. Ex: “2010-11-10T03:07:43”	true	true	false	false	false	datetime
results	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	true	false	true	false	related
reverse_primer	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
runMode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
runtype	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
sample	Unicode string data. Ex: “Hello World”	n/a	false	true	true	false	string
samples	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	true	false	true	false	related
seqKitBarcode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
sequencekitbarcode	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
sequencekitname	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
star	Boolean data. Ex: True	false	false	false	true	false	boolean
status	Unicode string data. Ex: “Hello World”		false	false	true	false	string
storageHost	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
storage_options	Unicode string data. Ex: “Hello World”	A	false	false	false	false	string
unique	Unicode string data. Ex: “Hello World”	n/a	false	false	false	true	string
usePreBeadfind	Boolean data. Ex: True	true	false	false	true	false	boolean
user_ack	Unicode string data. Ex: “Hello World”	U	false	false	false	false	string

Example Response¶

{
    "meta": {
        "limit": 1,
        "next": "/rundb/api/v1/experiment/?offset=1&limit=1&format=json",
        "offset": 0,
        "previous": null,
        "total_count": 136
    },
    "objects": [
        {
            "autoAnalyze": true,
            "baselineRun": false,
            "chefChipExpiration1": "",
            "chefChipExpiration2": "",
            "chefChipType1": "",
            "chefChipType2": "",
            "chefEndTime": null,
            "chefExtraInfo_1": "",
            "chefExtraInfo_2": "",
            "chefFlexibleWorkflow": "",
            "chefInstrumentName": "",
            "chefKitType": "",
            "chefLastUpdate": null,
            "chefLogPath": null,
            "chefLotNumber": "",
            "chefManufactureDate": "",
            "chefMessage": "",
            "chefOperationMode": "",
            "chefPackageVer": "",
            "chefProgress": 0,
            "chefProtocolDeviationName": null,
            "chefReagentID": "",
            "chefReagentsExpiration": "",
            "chefReagentsLot": "",
            "chefReagentsPart": "",
            "chefReagentsSerialNum": "",
            "chefRemainingSeconds": null,
            "chefSamplePos": "",
            "chefScriptVersion": "",
            "chefSolutionsExpiration": "",
            "chefSolutionsLot": "",
            "chefSolutionsPart": "",
            "chefSolutionsSerialNum": "",
            "chefStartTime": null,
            "chefStatus": "",
            "chefTipRackBarcode": "",
            "chipBarcode": "",
            "chipType": "530",
            "cycles": 0,
            "date": "2019-10-03T20:53:08.000599+00:00",
            "diskusage": 0,
            "displayName": "aa9309c5-5922-49f3-b901-987383b03e57",
            "eas_set": [
                {
                    "alignmentargs": "",
                    "analysisargs": "",
                    "barcodeKitName": "Ion Dual Barcode Kit 1-96",
                    "barcodedSamples": {},
                    "base_recalibration_mode": "standard_recal",
                    "basecallerargs": "",
                    "beadfindargs": "",
                    "calibrateargs": "",
                    "custom_args": false,
                    "date": "2019-10-03T20:53:08.000599+00:00",
                    "endBarcodeKitName": "",
                    "experiment": "/rundb/api/v1/experiment/163/",
                    "hotSpotRegionBedFile": "",
                    "id": 162,
                    "ionstatsargs": "",
                    "isDuplicateReads": false,
                    "isEditable": true,
                    "isOneTimeOverride": false,
                    "libraryKey": "TCAG",
                    "libraryKitBarcode": null,
                    "libraryKitName": "Ion AmpliSeq Library Kit Plus",
                    "mixedTypeRNA_hotSpotRegionBedFile": null,
                    "mixedTypeRNA_reference": null,
                    "mixedTypeRNA_targetRegionBedFile": null,
                    "prebasecallerargs": "",
                    "prethumbnailbasecallerargs": "",
                    "realign": false,
                    "reference": "",
                    "resource_uri": "/rundb/api/v1/experimentanalysissettings/162/",
                    "results": [],
                    "selectedPlugins": {},
                    "sseBedFile": "",
                    "status": "inactive",
                    "targetRegionBedFile": "",
                    "tfKey": "ATCG",
                    "threePrimeAdapter": "ATCACCGACTGCCCATAGAGAGGCTGAGAC",
                    "thumbnailalignmentargs": "",
                    "thumbnailanalysisargs": "",
                    "thumbnailbasecallerargs": "",
                    "thumbnailbeadfindargs": "",
                    "thumbnailcalibrateargs": "",
                    "thumbnailionstatsargs": ""
                }
            ],
            "expCompInfo": "",
            "expDir": "",
            "expName": "aa9309c5-5922-49f3-b901-987383b03e57",
            "flows": 500,
            "flowsInOrder": "",
            "ftpStatus": "",
            "id": 163,
            "isProton": "False",
            "isReverseRun": false,
            "log": {},
            "metaData": {},
            "notes": "",
            "pgmName": "",
            "pinnedRepResult": false,
            "plan": "/rundb/api/v1/plannedexperiment/170/",
            "platform": "S5",
            "rawdatastyle": "single",
            "reagentBarcode": "",
            "resource_uri": "/rundb/api/v1/experiment/163/",
            "resultDate": "2019-10-03T20:53:08.000620+00:00",
            "results": [],
            "reverse_primer": null,
            "runMode": "single",
            "runtype": "GENS",
            "sample": "",
            "samples": [],
            "seqKitBarcode": "",
            "sequencekitbarcode": "",
            "sequencekitname": "Ion S5 Sequencing Kit",
            "star": false,
            "status": "inactive",
            "storageHost": "",
            "storage_options": "A",
            "unique": "aa9309c5-5922-49f3-b901-987383b03e57",
            "usePreBeadfind": true,
            "user_ack": "U"
        }
    ]
}

Allowed list HTTP methods¶

GET
PATCH
PUT
DELETE

Allowed detail HTTP methods¶

GET
PATCH
PUT
DELETE