Compositeresult Resource

Resource URL: http://mytorrentserver/rundb/api/v1/compositeresult/

Schema URL: http://mytorrentserver/rundb/api/v1/compositeresult/schema/

Fields table

field	help text	default	nullable	readonly	blank	unique	type
status	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
processedflows	Integer data. Ex: 2673	n/a	false	false	false	false	integer
timeStamp	A date & time as a string. Ex: “2010-11-10T03:07:43”	true	false	false	true	false	datetime
analysismetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
reportLink	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
id	Integer data. Ex: 2673		false	false	true	true	integer
reportStatus	Unicode string data. Ex: “Hello World”	Nothing	true	false	false	false	string
resultsName	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
projects	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	false	false	false	false	related
qualitymetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
eas	A single related resource. Can be either a URI or set of nested resource data.	n/a	false	false	false	false	related
resource_uri	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string
libmetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
autoExempt	Boolean data. Ex: True	false	false	false	true	false	boolean
representative	Boolean data. Ex: True	false	false	false	true	false	boolean

Example request

Request URL: http://mytorrentserver/rundb/api/v1/compositeresult/?format=json&limit=1

Python example

import requests

ts_api_request = requests.get("http://mytorrentserver/rundb/api/v1/compositeresult/", params={"format": "json", "limit": 1})
ts_api_response = ts_api_request.json()

compositeresults = ts_api_response["objects"]

for compositeresult in compositeresults:
    print compositeresult

Torrent Server response

{
    "meta": {
        "previous": null,
        "total_count": 43354,
        "offset": 0,
        "limit": 1,
        "next": "/rundb/api/v1/compositeresult/?offset=1&limit=1&format=json"
    },
    "objects": [
        {
            "status": "Completed",
            "processedflows": 0,
            "analysis_metrics": {
                "ignored": 3003404,
                "lib": 134282829,
                "total_wells": 164699136,
                "pinned": 472926,
                "live": 135574135,
                "excluded": 16095180,
                "bead": 135800957,
                "resource_uri": "",
                "id": 31763,
                "empty": 9326669,
                "libFinal": 91521301
            },
            "timeStamp": "2014-01-23T07:39:52.000803+00:00",
            "analysismetrics": {
                "ignored": 3003404,
                "lib": 134282829,
                "total_wells": 164699136,
                "pinned": 472926,
                "live": 135574135,
                "excluded": 16095180,
                "bead": 135800957,
                "resource_uri": "",
                "id": 31763,
                "empty": 9326669,
                "libFinal": 91521301
            },
            "reportLink": "/output/Home/Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446_293943/",
            "id": 293943,
            "reportStatus": "Nothing",
            "quality_metrics": {
                "q0_mean_read_length": 168.0,
                "q0_reads": 91521301,
                "q0_bases": "15380233572",
                "q20_reads": 91521301,
                "q20_bases": "12209924742",
                "q20_mean_read_length": 103,
                "id": 31678,
                "resource_uri": ""
            },
            "resultsName": "Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446",
            "projects": [
                {
                    "resource_uri": "",
                    "id": 1080,
                    "name": "chef_827_909_20min_ext",
                    "modified": "2014-01-22T18:50:10.000920+00:00"
                }
            ],
            "qualitymetrics": {
                "q0_mean_read_length": 168.0,
                "q0_reads": 91521301,
                "q0_bases": "15380233572",
                "q20_reads": 91521301,
                "q20_bases": "12209924742",
                "q20_mean_read_length": 103,
                "id": 31678,
                "resource_uri": ""
            },
            "eas": {
                "resource_uri": "",
                "reference": "hg19",
                "barcodeKitName": "IonXpress"
            },
            "resource_uri": "/rundb/api/v1/compositeresult/293943/",
            "libmetrics": {
                "i100Q20_reads": 56284561,
                "aveKeyCounts": 71.0,
                "id": 32368,
                "resource_uri": "",
                "q20_mean_alignment_length": 142
            },
            "autoExempt": false,
            "representative": false
        }
    ]
}

Allowed HTTP methods

• get
• post
• put
• delete
• patch