Experiment Resource

Resource URL http://mytorrentserver/rundb/api/v1/experiment/
Schema URL http://mytorrentserver/rundb/api/v1/experiment/schema/

Resource Fields

field help text default nullable readonly blank unique type
isReverseRun Boolean data. Ex: True false false false true false boolean
chefLotNumber Unicode string data. Ex: “Hello World”   false false true false string
chipType Unicode string data. Ex: “Hello World” n/a false false false false string
chefProtocolDeviationName Unicode string data. Ex: “Hello World” n/a true false false false string
chefReagentID Unicode string data. Ex: “Hello World”   false false true false string
results Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a true false true false related
chefSolutionsPart Unicode string data. Ex: “Hello World”   false false true false string
runtype Unicode string data. Ex: “Hello World” n/a false false false false string
chefLastUpdate A date & time as a string. Ex: “2010-11-10T03:07:43” n/a true false false false datetime
storage_options Unicode string data. Ex: “Hello World” A false false false false string
chefChipExpiration1 Unicode string data. Ex: “Hello World”   false false true false string
chefChipExpiration2 Unicode string data. Ex: “Hello World”   false false true false string
diskusage Integer data. Ex: 2673 n/a true false false false integer
chefStatus Unicode string data. Ex: “Hello World”   false false true false string
reverse_primer Unicode string data. Ex: “Hello World” n/a true false false false string
seqKitBarcode Unicode string data. Ex: “Hello World”   false false true false string
id Integer data. Ex: 2673   false false true true integer
chefReagentsPart Unicode string data. Ex: “Hello World”   false false true false string
metaData Unicode string data. Ex: “Hello World” {} false false true false string
chefInstrumentName Unicode string data. Ex: “Hello World”   false false true false string
chefSolutionsSerialNum Unicode string data. Ex: “Hello World”   false false true false string
sample Unicode string data. Ex: “Hello World” n/a false true true false string
log Unicode string data. Ex: “Hello World” {} false false true false string
sequencekitbarcode Unicode string data. Ex: “Hello World” n/a true false false false string
resource_uri Unicode string data. Ex: “Hello World” n/a false true false false string
eas_set Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a true false true false related
chefLogPath Unicode string data. Ex: “Hello World” n/a true false false false string
chefFlexibleWorkflow Unicode string data. Ex: “Hello World”   false false true false string
platform Unicode string data. Ex: “Hello World”   false false true false string
chefScriptVersion Unicode string data. Ex: “Hello World”   false false true false string
samples Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a true false true false related
chefOperationMode Unicode string data. Ex: “Hello World”   false false true false string
chefManufactureDate Unicode string data. Ex: “Hello World”   false false true false string
chefSamplePos Unicode string data. Ex: “Hello World”   false false true false string
pinnedRepResult Boolean data. Ex: True false false false true false boolean
chefReagentsExpiration Unicode string data. Ex: “Hello World”   false false true false string
chefSolutionsLot Unicode string data. Ex: “Hello World”   false false true false string
reagentBarcode Unicode string data. Ex: “Hello World”   false false true false string
chefProgress Floating point numeric data. Ex: 26.73 0 false false true false float
chefKitType Unicode string data. Ex: “Hello World”   false false true false string
star Boolean data. Ex: True false false false true false boolean
chefPackageVer Unicode string data. Ex: “Hello World”   false false true false string
usePreBeadfind Boolean data. Ex: True true false false true false boolean
isProton Unicode string data. Ex: “Hello World” n/a false true false false string
expCompInfo Unicode string data. Ex: “Hello World”   false false true false string
flowsInOrder Unicode string data. Ex: “Hello World”   false false true false string
flows Integer data. Ex: 2673 n/a false false false false integer
resultDate A date & time as a string. Ex: “2010-11-10T03:07:43” true true false false false datetime
chefTipRackBarcode Unicode string data. Ex: “Hello World”   false false true false string
chefRemainingSeconds Integer data. Ex: 2673 n/a true false false false integer
plan A single related resource. Can be either a URI or set of nested resource data. n/a true false true false related
date A date & time as a string. Ex: “2010-11-10T03:07:43” n/a false false false false datetime
chefExtraInfo_1 Unicode string data. Ex: “Hello World”   false false true false string
chefExtraInfo_2 Unicode string data. Ex: “Hello World”   false false true false string
unique Unicode string data. Ex: “Hello World” n/a false false false true string
expDir Unicode string data. Ex: “Hello World” n/a false false false false string
autoAnalyze Boolean data. Ex: True true false false true false boolean
ftpStatus Unicode string data. Ex: “Hello World”   false false true false string
chefMessage Unicode string data. Ex: “Hello World”   false false true false string
chefEndTime A date & time as a string. Ex: “2010-11-10T03:07:43” n/a true false false false datetime
displayName Unicode string data. Ex: “Hello World”   false false false false string
pgmName Unicode string data. Ex: “Hello World” n/a false false false false string
runMode Unicode string data. Ex: “Hello World”   false false true false string
notes Unicode string data. Ex: “Hello World” n/a true false false false string
sequencekitname Unicode string data. Ex: “Hello World” n/a true false false false string
chipBarcode Unicode string data. Ex: “Hello World”   false false true false string
chefStartTime A date & time as a string. Ex: “2010-11-10T03:07:43” n/a true false false false datetime
chefSolutionsExpiration Unicode string data. Ex: “Hello World”   false false true false string
chefReagentsLot Unicode string data. Ex: “Hello World”   false false true false string
storageHost Unicode string data. Ex: “Hello World” n/a true false false false string
expName Unicode string data. Ex: “Hello World” n/a false false false false string
status Unicode string data. Ex: “Hello World”   false false true false string
chefReagentsSerialNum Unicode string data. Ex: “Hello World”   false false true false string
cycles Integer data. Ex: 2673 n/a false false false false integer
chefChipType2 Unicode string data. Ex: “Hello World”   false false true false string
chefChipType1 Unicode string data. Ex: “Hello World”   false false true false string
baselineRun Boolean data. Ex: True false false false true false boolean
user_ack Unicode string data. Ex: “Hello World” U false false false false string
rawdatastyle Unicode string data. Ex: “Hello World” single true false false false string

Example Response

{
    "meta": {
        "previous": null,
        "total_count": 95,
        "offset": 0,
        "limit": 1,
        "next": "/rundb/api/v1/experiment/?offset=1&limit=1&format=json"
    },
    "objects": [
        {
            "isReverseRun": false,
            "chefLotNumber": "",
            "chipType": "",
            "chefProtocolDeviationName": null,
            "chefReagentID": "",
            "results": [],
            "chefSolutionsPart": "",
            "runtype": "GENS",
            "chefLastUpdate": null,
            "storage_options": "A",
            "chefChipExpiration1": "",
            "chefChipExpiration2": "",
            "diskusage": null,
            "chefStatus": "",
            "reverse_primer": null,
            "seqKitBarcode": "",
            "id": 3,
            "chefReagentsPart": "",
            "metaData": {},
            "chefInstrumentName": "",
            "chefSolutionsSerialNum": "",
            "sample": "",
            "log": {},
            "sequencekitbarcode": "",
            "resource_uri": "/rundb/api/v1/experiment/3/",
            "eas_set": [
                {
                    "ionstatsargs": "",
                    "isEditable": true,
                    "endBarcodeKitName": "",
                    "hotSpotRegionBedFile": "",
                    "results": [],
                    "mixedTypeRNA_reference": null,
                    "mixedTypeRNA_targetRegionBedFile": null,
                    "targetRegionBedFile": "",
                    "thumbnailalignmentargs": "",
                    "thumbnailanalysisargs": "",
                    "id": 3,
                    "barcodedSamples": {},
                    "base_recalibration_mode": "standard_recal",
                    "reference": "e_coli_dh10b",
                    "isOneTimeOverride": false,
                    "mixedTypeRNA_hotSpotRegionBedFile": null,
                    "analysisargs": "",
                    "thumbnailcalibrateargs": "",
                    "realign": false,
                    "selectedPlugins": {},
                    "experiment": "/rundb/api/v1/experiment/3/",
                    "barcodeKitName": "",
                    "beadfindargs": "",
                    "threePrimeAdapter": "ATCACCGACTGCCCATAGAGAGGCTGAGAC",
                    "thumbnailbasecallerargs": "",
                    "status": "planned",
                    "prebasecallerargs": "",
                    "thumbnailionstatsargs": "",
                    "prethumbnailbasecallerargs": "",
                    "alignmentargs": "",
                    "isDuplicateReads": false,
                    "libraryKey": "TCAG",
                    "date": "2017-07-22T06:43:55.000739+00:00",
                    "libraryKitName": "Ion Xpress Plus Fragment Library Kit",
                    "thumbnailbeadfindargs": "",
                    "calibrateargs": "",
                    "tfKey": "ATCG",
                    "libraryKitBarcode": null,
                    "sseBedFile": "",
                    "basecallerargs": "",
                    "custom_args": false,
                    "resource_uri": "/rundb/api/v1/experimentanalysissettings/3/"
                }
            ],
            "chefLogPath": null,
            "chefFlexibleWorkflow": "",
            "platform": "PGM",
            "chefScriptVersion": "",
            "samples": [],
            "chefOperationMode": "",
            "chefManufactureDate": "",
            "chefSamplePos": "",
            "pinnedRepResult": false,
            "chefReagentsExpiration": "",
            "chefSolutionsLot": "",
            "reagentBarcode": "",
            "chefProgress": 0,
            "chefKitType": "",
            "star": false,
            "chefPackageVer": "",
            "usePreBeadfind": false,
            "isProton": "False",
            "expCompInfo": "",
            "flowsInOrder": "",
            "flows": 500,
            "resultDate": "2017-07-22T06:41:42.000083+00:00",
            "chefTipRackBarcode": "",
            "chefRemainingSeconds": null,
            "plan": "/rundb/api/v1/plannedexperiment/22/",
            "date": "2017-07-22T06:41:42.000083+00:00",
            "chefExtraInfo_1": "",
            "chefExtraInfo_2": "",
            "unique": "ca9e2550-8adb-4d9b-9156-321bbbb1498e",
            "expDir": "",
            "autoAnalyze": true,
            "ftpStatus": "Complete",
            "chefMessage": "",
            "chefEndTime": null,
            "displayName": "P1W5W",
            "pgmName": "",
            "runMode": "single",
            "notes": "",
            "sequencekitname": "IonPGM200Kit-v2",
            "chipBarcode": "",
            "chefStartTime": null,
            "chefSolutionsExpiration": "",
            "chefReagentsLot": "",
            "storageHost": "",
            "expName": "ca9e2550-8adb-4d9b-9156-321bbbb1498e",
            "status": "planned",
            "chefReagentsSerialNum": "",
            "cycles": 0,
            "chefChipType2": "",
            "chefChipType1": "",
            "baselineRun": false,
            "user_ack": "U",
            "rawdatastyle": "single"
        }
    ]
}

Allowed list HTTP methods

  • GET
  • PATCH
  • PUT
  • DELETE

Allowed detail HTTP methods

  • GET
  • PATCH
  • PUT
  • DELETE