Experiment Resource¶

Resource URL http://mytorrentserver/rundb/api/v1/experiment/
Schema URL http://mytorrentserver/rundb/api/v1/experiment/schema/

Resource Fields¶

field	help text	default	nullable	readonly	blank	unique	type
isReverseRun	Boolean data. Ex: True	false	false	false	true	false	boolean
chefLotNumber	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chipType	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
user_ack	Unicode string data. Ex: “Hello World”	U	false	false	false	false	string
chefLogPath	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
results	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	false	false	false	false	related
chefSolutionsPart	Unicode string data. Ex: “Hello World”		false	false	true	false	string
runtype	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
chefLastUpdate	A date & time as a string. Ex: “2010-11-10T03:07:43”	n/a	true	false	false	false	datetime
storage_options	Unicode string data. Ex: “Hello World”	A	false	false	false	false	string
chefChipExpiration1	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefChipExpiration2	Unicode string data. Ex: “Hello World”		false	false	true	false	string
diskusage	Integer data. Ex: 2673	n/a	true	false	false	false	integer
chefStatus	Unicode string data. Ex: “Hello World”		false	false	true	false	string
reverse_primer	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
seqKitBarcode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
id	Integer data. Ex: 2673		false	false	true	true	integer
chefReagentsPart	Unicode string data. Ex: “Hello World”		false	false	true	false	string
metaData	Unicode string data. Ex: “Hello World”	{}	false	false	true	false	string
chefInstrumentName	Unicode string data. Ex: “Hello World”		false	false	true	false	string
sample	Unicode string data. Ex: “Hello World”	n/a	false	true	true	false	string
log	Unicode string data. Ex: “Hello World”	{}	false	false	true	false	string
sequencekitbarcode	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
resource_uri	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string
eas_set	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	true	false	true	false	related
chefReagentID	Unicode string data. Ex: “Hello World”		false	false	true	false	string
platform	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefScriptVersion	Unicode string data. Ex: “Hello World”		false	false	true	false	string
samples	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	true	false	true	false	related
chefManufactureDate	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefSamplePos	Unicode string data. Ex: “Hello World”		false	false	true	false	string
pinnedRepResult	Boolean data. Ex: True	false	false	false	true	false	boolean
chefReagentsExpiration	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefSolutionsLot	Unicode string data. Ex: “Hello World”		false	false	true	false	string
reagentBarcode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefProgress	Floating point numeric data. Ex: 26.73	0	false	false	true	false	float
chefKitType	Unicode string data. Ex: “Hello World”		false	false	true	false	string
star	Boolean data. Ex: True	false	false	false	true	false	boolean
chefPackageVer	Unicode string data. Ex: “Hello World”		false	false	true	false	string
isProton	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string
expCompInfo	Unicode string data. Ex: “Hello World”		false	false	true	false	string
flowsInOrder	Unicode string data. Ex: “Hello World”		false	false	true	false	string
flows	Integer data. Ex: 2673	n/a	false	false	false	false	integer
resultDate	A date & time as a string. Ex: “2010-11-10T03:07:43”	true	true	false	false	false	datetime
chefTipRackBarcode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
plan	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	true	false	related
date	A date & time as a string. Ex: “2010-11-10T03:07:43”	n/a	false	false	false	false	datetime
chefExtraInfo_1	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefExtraInfo_2	Unicode string data. Ex: “Hello World”		false	false	true	false	string
unique	Unicode string data. Ex: “Hello World”	n/a	false	false	false	true	string
expDir	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
autoAnalyze	Boolean data. Ex: True	true	false	false	true	false	boolean
ftpStatus	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefMessage	Unicode string data. Ex: “Hello World”		false	false	true	false	string
cycles	Integer data. Ex: 2673	n/a	false	false	false	false	integer
displayName	Unicode string data. Ex: “Hello World”		false	false	false	false	string
runMode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
notes	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
sequencekitname	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
chipBarcode	Unicode string data. Ex: “Hello World”		false	false	true	false	string
pgmName	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
chefSolutionsExpiration	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefReagentsLot	Unicode string data. Ex: “Hello World”		false	false	true	false	string
storageHost	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
expName	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
status	Unicode string data. Ex: “Hello World”		false	false	true	false	string
usePreBeadfind	Boolean data. Ex: True	true	false	false	true	false	boolean
chefChipType2	Unicode string data. Ex: “Hello World”		false	false	true	false	string
chefChipType1	Unicode string data. Ex: “Hello World”		false	false	true	false	string
baselineRun	Boolean data. Ex: True	false	false	false	true	false	boolean
rawdatastyle	Unicode string data. Ex: “Hello World”	single	true	false	false	false	string

Example Response¶

{
    "meta": {
        "previous": null,
        "total_count": 85,
        "offset": 0,
        "limit": 1,
        "next": "/rundb/api/v1/experiment/?offset=1&limit=1&format=json"
    },
    "objects": [
        {
            "isReverseRun": false,
            "chefLotNumber": "",
            "chipType": "",
            "user_ack": "U",
            "chefLogPath": null,
            "results": [],
            "chefSolutionsPart": "",
            "runtype": "GENS",
            "chefLastUpdate": null,
            "storage_options": "A",
            "chefChipExpiration1": "",
            "chefChipExpiration2": "",
            "diskusage": null,
            "chefStatus": "",
            "reverse_primer": null,
            "seqKitBarcode": "",
            "id": 3,
            "chefReagentsPart": "",
            "metaData": {},
            "chefInstrumentName": "",
            "sample": "",
            "log": {},
            "sequencekitbarcode": "",
            "resource_uri": "/rundb/api/v1/experiment/3/",
            "eas_set": [
                {
                    "ionstatsargs": "",
                    "isEditable": true,
                    "hotSpotRegionBedFile": "",
                    "results": [],
                    "mixedTypeRNA_reference": null,
                    "mixedTypeRNA_targetRegionBedFile": null,
                    "targetRegionBedFile": "",
                    "thumbnailalignmentargs": "",
                    "thumbnailanalysisargs": "",
                    "id": 3,
                    "barcodedSamples": {},
                    "base_recalibration_mode": "standard_recal",
                    "reference": "e_coli_dh10b",
                    "isOneTimeOverride": false,
                    "mixedTypeRNA_hotSpotRegionBedFile": null,
                    "analysisargs": "",
                    "thumbnailcalibrateargs": "",
                    "realign": false,
                    "selectedPlugins": {},
                    "experiment": "/rundb/api/v1/experiment/3/",
                    "barcodeKitName": "",
                    "beadfindargs": "",
                    "threePrimeAdapter": "ATCACCGACTGCCCATAGAGAGGCTGAGAC",
                    "thumbnailbasecallerargs": "",
                    "status": "planned",
                    "prebasecallerargs": "",
                    "thumbnailionstatsargs": "",
                    "prethumbnailbasecallerargs": "",
                    "alignmentargs": "",
                    "isDuplicateReads": false,
                    "libraryKey": "TCAG",
                    "date": "2017-03-08T16:27:32.000781+00:00",
                    "libraryKitName": "Ion Xpress Plus Fragment Library Kit",
                    "thumbnailbeadfindargs": "",
                    "calibrateargs": "",
                    "tfKey": "ATCG",
                    "libraryKitBarcode": null,
                    "sseBedFile": "",
                    "basecallerargs": "",
                    "custom_args": false,
                    "resource_uri": "/rundb/api/v1/experimentanalysissettings/3/"
                }
            ],
            "chefReagentID": "",
            "platform": "PGM",
            "chefScriptVersion": "",
            "samples": [],
            "chefManufactureDate": "",
            "chefSamplePos": "",
            "pinnedRepResult": false,
            "chefReagentsExpiration": "",
            "chefSolutionsLot": "",
            "reagentBarcode": "",
            "chefProgress": 0,
            "chefKitType": "",
            "star": false,
            "chefPackageVer": "",
            "isProton": "False",
            "expCompInfo": "",
            "flowsInOrder": "",
            "flows": 500,
            "resultDate": "2017-03-08T16:24:27.000296+00:00",
            "chefTipRackBarcode": "",
            "plan": "/rundb/api/v1/plannedexperiment/22/",
            "date": "2017-03-08T16:24:27.000295+00:00",
            "chefExtraInfo_1": "",
            "chefExtraInfo_2": "",
            "unique": "ad416288-d7b1-49e6-bb63-f7459e824b21",
            "expDir": "",
            "autoAnalyze": true,
            "ftpStatus": "Complete",
            "chefMessage": "",
            "cycles": 0,
            "displayName": "0ZQVQ",
            "runMode": "single",
            "notes": "",
            "sequencekitname": "IonPGM200Kit-v2",
            "chipBarcode": "",
            "pgmName": "",
            "chefSolutionsExpiration": "",
            "chefReagentsLot": "",
            "storageHost": "",
            "expName": "ad416288-d7b1-49e6-bb63-f7459e824b21",
            "status": "planned",
            "usePreBeadfind": false,
            "chefChipType2": "",
            "chefChipType1": "",
            "baselineRun": false,
            "rawdatastyle": "single"
        }
    ]
}

Allowed HTTP methods¶

get
post
put
delete
patch