Database Table rundb_referencegenome

Postgres database: iondb

Postgres table: rundb_referencegenome

Reference genome description data model.

Lifecycle

This data is created when a reference genome is uploaded in the Torrent Browser. These data are used by the PGM and Proton to build a list of available genomes.

Schema

Field	Type	Description
celery_task_id	String (up to 60)	celery task id
date	Date (with time)	date
enabled	Boolean (Either True or False)	enabled
file_monitor	FileMonitor (ForeignKey)	the related rundb.FileMonitor row
id	Integer	ID
identity_hash	String (up to 40)	identity hash
index_version	String (up to 512)	index version
name	String (up to 512)	name
notes	Text	notes
reference_path	String (up to 1024)	reference path
short_name	String (up to 512)	short name
source	String (up to 512)	source
species	String (up to 512)	species
status	String (up to 512)	status
verbose_error	String (up to 3000)	verbose error
version	String (up to 100)	version