Postgres database: iondb
Postgres table: rundb_analysisargs
Analysis arguments data model.
Updated when an analysis is launched or re-analyzed.
Field | Type | Description |
---|---|---|
active | Boolean (Either True or False) | active |
alignmentargs | String (up to 5000) | Default Alignment args |
analysisargs | String (up to 5000) | Default Analysis args |
basecallerargs | String (up to 5000) | Default Basecaller args |
beadfindargs | String (up to 5000) | Default Beadfind args |
calibrateargs | String (up to 5000) | Default Calibration args, used for recalibration |
chipType | String (up to 128) | chipType |
chip_default | Boolean (Either True or False) | chip default |
id | Integer | ID |
libraryKitName | String (up to 512) | libraryKitName |
name | String (up to 256) | name |
prebasecallerargs | String (up to 5000) | Default Pre Basecaller args, used for recalibration |
prethumbnailbasecallerargs | String (up to 5000) | Default Thumbnail Pre Basecaller args, used for recalibration |
samplePrepKitName | String (up to 512) | samplePrepKitName |
sequenceKitName | String (up to 512) | sequenceKitName |
templateKitName | String (up to 512) | templateKitName |
thumbnailalignmentargs | String (up to 5000) | Default Thumbnail Alignment args |
thumbnailanalysisargs | String (up to 5000) | Default Thumbnail Analysis args |
thumbnailbasecallerargs | String (up to 5000) | Default Thumbnail Basecaller args |
thumbnailbeadfindargs | String (up to 5000) | Default Thumbnail Beadfind args |
thumbnailcalibrateargs | String (up to 5000) | Default Thumbnail Calibration args, used for recalibration |