Monitorresult Resource

Resource URL: http://mytorrentserver/rundb/api/v1/monitorresult/

Schema URL: http://mytorrentserver/rundb/api/v1/monitorresult/schema/

Fields table

field	help text	default	nullable	readonly	blank	unique	type
status	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
processedflows	Integer data. Ex: 2673	n/a	false	false	false	false	integer
libmetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
timeStamp	A date & time as a string. Ex: “2010-11-10T03:07:43”	true	false	false	true	false	datetime
analysismetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
reportLink	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
library	Unicode string data. Ex: “Hello World”	n/a	true	true	false	false	string
id	Integer data. Ex: 2673		false	false	true	true	integer
reportStatus	Unicode string data. Ex: “Hello World”	Nothing	true	false	false	false	string
experiment	A single related resource. Can be either a URI or set of nested resource data.	n/a	false	false	false	false	related
resultsName	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
projects	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	false	false	false	false	related
qualitymetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
eas	A single related resource. Can be either a URI or set of nested resource data.	n/a	false	false	false	false	related
resource_uri	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string
barcodeId	Unicode string data. Ex: “Hello World”	n/a	true	true	false	false	string
autoExempt	Boolean data. Ex: True	false	false	false	true	false	boolean
representative	Boolean data. Ex: True	false	false	false	true	false	boolean

Example request

Request URL: http://mytorrentserver/rundb/api/v1/monitorresult/?format=json&limit=1

Python example

import requests

ts_api_request = requests.get("http://mytorrentserver/rundb/api/v1/monitorresult/", params={"format": "json", "limit": 1})
ts_api_response = ts_api_request.json()

monitorresults = ts_api_response["objects"]

for monitorresult in monitorresults:
    print monitorresult

Torrent Server response

{
    "meta": {
        "previous": null,
        "total_count": 49,
        "offset": 0,
        "limit": 1,
        "next": "/rundb/api/v1/monitorresult/?offset=1&limit=1&format=json"
    },
    "objects": [
        {
            "status": "Completed",
            "processedflows": 0,
            "libmetrics": {
                "i100Q20_reads": 63353502,
                "aveKeyCounts": 84,
                "id": 52457,
                "resource_uri": "",
                "q20_mean_alignment_length": 180
            },
            "timeStamp": "2015-02-03T02:21:07.000963+00:00",
            "analysismetrics": {
                "ignored": 1416707,
                "lib": 122792563,
                "total_wells": 164699136,
                "pinned": 345310,
                "live": 122796187,
                "excluded": 16095180,
                "bead": 123099544,
                "resource_uri": "",
                "id": 54528,
                "empty": 23742395,
                "libFinal": 85173747
            },
            "reportLink": "/output/Home/Auto_user_F3--909--R78811-mosaic1tru4_1xot2_na12878_1400Mmol_4chips-co_33084_317423/",
            "library": "hg19",
            "id": 317423,
            "reportStatus": "Nothing",
            "experiment": {
                "ftpStatus": "Complete",
                "chipInstrumentType": "proton",
                "displayName": "user F3--909--R78811-mosaic1tru4 1xot2 na12878 1400Mmol 4chips-co",
                "chipType": "P1.1.17",
                "notes": "mosaic 1 ot 4 chips 1400M molecules",
                "chipDescription": "PI",
                "resultDate": "2015-02-03T02:21:07.000963+00:00",
                "flows": 520,
                "runMode": "single",
                "expName": "R_2015_02_02_13_18_20_user_F3--909--R78811-mosaic1tru4_1xot2_na12878_1400Mmol_4chips-co",
                "storage_options": "D",
                "pgmName": "f3",
                "date": "2015-02-02T18:23:59+00:00",
                "star": false,
                "resource_uri": "",
                "qcThresholds": {
                    "Key Signal (1-100)": 30,
                    "Usable Sequence (%)": 30,
                    "Bead Loading (%)": 30
                },
                "id": 33084,
                "plan": {
                    "runType": "WGNM",
                    "id": 111321,
                    "resource_uri": ""
                }
            },
            "resultsName": "Auto_user_F3--909--R78811-mosaic1tru4_1xot2_na12878_1400Mmol_4chips-co_33084",
            "projects": [
                {
                    "resource_uri": "",
                    "id": 1622,
                    "name": "mosaic_enterprise",
                    "modified": "2015-02-02T18:26:29.000916+00:00"
                }
            ],
            "qualitymetrics": {
                "q0_mean_read_length": 203.07748070541,
                "q0_reads": 85173747,
                "q0_bases": "17296869963",
                "q20_reads": 85173747,
                "q20_bases": "15168226464",
                "q20_mean_read_length": 203,
                "id": 50272,
                "resource_uri": ""
            },
            "eas": {
                "resource_uri": "",
                "reference": "hg19",
                "barcodeKitName": "IonXpress"
            },
            "resource_uri": "/rundb/api/v1/monitorresult/317423/",
            "barcodeId": "IonXpress",
            "autoExempt": false,
            "representative": false
        }
    ]
}

Allowed HTTP methods

• get
• post
• put
• delete
• patch