Database Table rundb_libmetrics ============================================================================ Postgres database: ``iondb`` Postgres table: ``rundb_libmetrics`` .. include:: ../manual_database_ref_docs/rundb_libmetrics.rst Schema ------- +--------------------------------+-------------------------+---------------------------------+ | Field | Type | Description | +================================+=========================+=================================+ | Genome\_Version | String (up to 512) | Genome Version | +--------------------------------+-------------------------+---------------------------------+ | Index\_Version | String (up to 512) | Index Version | +--------------------------------+-------------------------+---------------------------------+ | align\_sample | Integer | align sample | +--------------------------------+-------------------------+---------------------------------+ | aveKeyCounts | Floating point number | aveKeyCounts | +--------------------------------+-------------------------+---------------------------------+ | cf | Floating point number | cf | +--------------------------------+-------------------------+---------------------------------+ | dr | Floating point number | dr | +--------------------------------+-------------------------+---------------------------------+ | duplicate\_reads | Integer | duplicate reads | +--------------------------------+-------------------------+---------------------------------+ | genome | String (up to 512) | genome | +--------------------------------+-------------------------+---------------------------------+ | genomesize | Big (8 byte) integer | genomesize | +--------------------------------+-------------------------+---------------------------------+ | i100Q10\_reads | Integer | i100Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i100Q17\_reads | Integer | i100Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i100Q20\_reads | Integer | i100Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i100Q47\_reads | Integer | i100Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i100Q7\_reads | Integer | i100Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i150Q10\_reads | Integer | i150Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i150Q17\_reads | Integer | i150Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i150Q20\_reads | Integer | i150Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i150Q47\_reads | Integer | i150Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i150Q7\_reads | Integer | i150Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i200Q10\_reads | Integer | i200Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i200Q17\_reads | Integer | i200Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i200Q20\_reads | Integer | i200Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i200Q47\_reads | Integer | i200Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i200Q7\_reads | Integer | i200Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i250Q10\_reads | Integer | i250Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i250Q17\_reads | Integer | i250Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i250Q20\_reads | Integer | i250Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i250Q47\_reads | Integer | i250Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i250Q7\_reads | Integer | i250Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i300Q10\_reads | Integer | i300Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i300Q17\_reads | Integer | i300Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i300Q20\_reads | Integer | i300Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i300Q47\_reads | Integer | i300Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i300Q7\_reads | Integer | i300Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i350Q10\_reads | Integer | i350Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i350Q17\_reads | Integer | i350Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i350Q20\_reads | Integer | i350Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i350Q47\_reads | Integer | i350Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i350Q7\_reads | Integer | i350Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i400Q10\_reads | Integer | i400Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i400Q17\_reads | Integer | i400Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i400Q20\_reads | Integer | i400Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i400Q47\_reads | Integer | i400Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i400Q7\_reads | Integer | i400Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i450Q10\_reads | Integer | i450Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i450Q17\_reads | Integer | i450Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i450Q20\_reads | Integer | i450Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i450Q47\_reads | Integer | i450Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i450Q7\_reads | Integer | i450Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i500Q10\_reads | Integer | i500Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i500Q17\_reads | Integer | i500Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i500Q20\_reads | Integer | i500Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i500Q47\_reads | Integer | i500Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i500Q7\_reads | Integer | i500Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i50Q10\_reads | Integer | i50Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i50Q17\_reads | Integer | i50Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i50Q20\_reads | Integer | i50Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i50Q47\_reads | Integer | i50Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i50Q7\_reads | Integer | i50Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i550Q10\_reads | Integer | i550Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i550Q17\_reads | Integer | i550Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i550Q20\_reads | Integer | i550Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i550Q47\_reads | Integer | i550Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i550Q7\_reads | Integer | i550Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | i600Q10\_reads | Integer | i600Q10 reads | +--------------------------------+-------------------------+---------------------------------+ | i600Q17\_reads | Integer | i600Q17 reads | +--------------------------------+-------------------------+---------------------------------+ | i600Q20\_reads | Integer | i600Q20 reads | +--------------------------------+-------------------------+---------------------------------+ | i600Q47\_reads | Integer | i600Q47 reads | +--------------------------------+-------------------------+---------------------------------+ | i600Q7\_reads | Integer | i600Q7 reads | +--------------------------------+-------------------------+---------------------------------+ | id | Integer | ID | +--------------------------------+-------------------------+---------------------------------+ | ie | Floating point number | ie | +--------------------------------+-------------------------+---------------------------------+ | q10\_alignments | Integer | q10 alignments | +--------------------------------+-------------------------+---------------------------------+ | q10\_longest\_alignment | Integer | q10 longest alignment | +--------------------------------+-------------------------+---------------------------------+ | q10\_mapped\_bases | Big (8 byte) integer | q10 mapped bases | +--------------------------------+-------------------------+---------------------------------+ | q10\_mean\_alignment\_length | Integer | q10 mean alignment length | +--------------------------------+-------------------------+---------------------------------+ | q17\_alignments | Integer | q17 alignments | +--------------------------------+-------------------------+---------------------------------+ | q17\_longest\_alignment | Integer | q17 longest alignment | +--------------------------------+-------------------------+---------------------------------+ | q17\_mapped\_bases | Big (8 byte) integer | q17 mapped bases | +--------------------------------+-------------------------+---------------------------------+ | q17\_mean\_alignment\_length | Integer | q17 mean alignment length | +--------------------------------+-------------------------+---------------------------------+ | q20\_alignments | Integer | q20 alignments | +--------------------------------+-------------------------+---------------------------------+ | q20\_longest\_alignment | Integer | q20 longest alignment | +--------------------------------+-------------------------+---------------------------------+ | q20\_mapped\_bases | Big (8 byte) integer | q20 mapped bases | +--------------------------------+-------------------------+---------------------------------+ | q20\_mean\_alignment\_length | Integer | q20 mean alignment length | +--------------------------------+-------------------------+---------------------------------+ | q47\_alignments | Integer | q47 alignments | +--------------------------------+-------------------------+---------------------------------+ | q47\_longest\_alignment | Integer | q47 longest alignment | +--------------------------------+-------------------------+---------------------------------+ | q47\_mapped\_bases | Big (8 byte) integer | q47 mapped bases | +--------------------------------+-------------------------+---------------------------------+ | q47\_mean\_alignment\_length | Integer | q47 mean alignment length | +--------------------------------+-------------------------+---------------------------------+ | q7\_alignments | Integer | q7 alignments | +--------------------------------+-------------------------+---------------------------------+ | q7\_longest\_alignment | Integer | q7 longest alignment | +--------------------------------+-------------------------+---------------------------------+ | q7\_mapped\_bases | Big (8 byte) integer | q7 mapped bases | +--------------------------------+-------------------------+---------------------------------+ | q7\_mean\_alignment\_length | Integer | q7 mean alignment length | +--------------------------------+-------------------------+---------------------------------+ | raw\_accuracy | Floating point number | raw accuracy | +--------------------------------+-------------------------+---------------------------------+ | report | Results (ForeignKey) | the related rundb.Results row | +--------------------------------+-------------------------+---------------------------------+ | sysSNR | Floating point number | sysSNR | +--------------------------------+-------------------------+---------------------------------+ | totalNumReads | Integer | totalNumReads | +--------------------------------+-------------------------+---------------------------------+ | total\_mapped\_reads | Big (8 byte) integer | total mapped reads | +--------------------------------+-------------------------+---------------------------------+ | total\_mapped\_target\_bases | Big (8 byte) integer | total mapped target bases | +--------------------------------+-------------------------+---------------------------------+