Monitorresult Resource

Resource URL: http://mytorrentserver/rundb/api/v1/monitorresult/

Schema URL: http://mytorrentserver/rundb/api/v1/monitorresult/schema/

Fields table

field	help text	default	nullable	readonly	blank	unique	type
status	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
processedflows	Integer data. Ex: 2673	n/a	false	false	false	false	integer
libmetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
timeStamp	A date & time as a string. Ex: “2010-11-10T03:07:43”	true	false	false	true	false	datetime
analysismetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
reportLink	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
library	Unicode string data. Ex: “Hello World”	n/a	true	true	false	false	string
id	Integer data. Ex: 2673		false	false	true	true	integer
reportStatus	Unicode string data. Ex: “Hello World”	Nothing	true	false	false	false	string
experiment	A single related resource. Can be either a URI or set of nested resource data.	n/a	false	false	false	false	related
resultsName	Unicode string data. Ex: “Hello World”	n/a	false	false	false	false	string
projects	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	false	false	false	false	related
qualitymetrics	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	false	false	related
eas	A single related resource. Can be either a URI or set of nested resource data.	n/a	false	false	false	false	related
resource_uri	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string
barcodeId	Unicode string data. Ex: “Hello World”	n/a	true	true	false	false	string
autoExempt	Boolean data. Ex: True	false	false	false	true	false	boolean
representative	Boolean data. Ex: True	false	false	false	true	false	boolean

Example request

Request URL: http://mytorrentserver/rundb/api/v1/monitorresult/?format=json&limit=1

Python example

import requests

ts_api_request = requests.get("http://mytorrentserver/rundb/api/v1/monitorresult/", params={"format": "json", "limit": 1})
ts_api_response = ts_api_request.json()

monitorresults = ts_api_response["objects"]

for monitorresult in monitorresults:
    print monitorresult

Torrent Server response

{
    "meta": {
        "previous": null,
        "total_count": 159,
        "offset": 0,
        "limit": 1,
        "next": "/rundb/api/v1/monitorresult/?offset=1&limit=1&format=json"
    },
    "objects": [
        {
            "status": "Completed",
            "processedflows": 0,
            "libmetrics": {
                "i100Q20_reads": 61016174,
                "aveKeyCounts": 89.0,
                "id": 41874,
                "resource_uri": "",
                "q20_mean_alignment_length": 159
            },
            "timeStamp": "2014-06-28T07:11:58.000789+00:00",
            "analysismetrics": {
                "ignored": 1364892,
                "lib": 118063544,
                "total_wells": 164699136,
                "pinned": 463867,
                "live": 118074386,
                "excluded": 16095180,
                "bead": 118525043,
                "resource_uri": "",
                "id": 41726,
                "empty": 28250154,
                "libFinal": 85604279
            },
            "reportLink": "/output/Home/Auto_user_Z28-428--r65714-pou4_dbsa_23958_304393/",
            "library": "hg19",
            "id": 304393,
            "reportStatus": "Nothing",
            "experiment": {
                "ftpStatus": "Complete",
                "chipInstrumentType": "proton",
                "displayName": "user Z28-428--r65714-pou4 dbsa",
                "chipType": "P1.1.17",
                "notes": "",
                "chipDescription": "PI",
                "resultDate": "2014-06-28T07:11:58.000789+00:00",
                "flows": 520,
                "runMode": "single",
                "expName": "R_2014_06_27_17_13_22_user_Z28-428--r65714-pou4_dbsa",
                "storage_options": "D",
                "pgmName": "Z28",
                "date": "2014-06-27T21:19:01+00:00",
                "star": false,
                "resource_uri": "",
                "qcThresholds": {
                    "Key Signal (1-100)": 30,
                    "Usable Sequence (%)": 30,
                    "Bead Loading (%)": 30
                },
                "id": 23958,
                "plan": {
                    "runType": "AMPS_EXOME",
                    "id": 102195,
                    "resource_uri": ""
                }
            },
            "resultsName": "Auto_user_Z28-428--r65714-pou4_dbsa_23958",
            "projects": [
                {
                    "resource_uri": "",
                    "id": 1385,
                    "name": "auto_chip",
                    "modified": "2014-06-27T21:21:43.000081+00:00"
                }
            ],
            "qualitymetrics": {
                "q0_mean_read_length": 178.362197969099,
                "q0_reads": 85604279,
                "q0_bases": "15268567358",
                "q20_reads": 85604279,
                "q20_bases": "13060288783",
                "q20_mean_read_length": 178,
                "id": 39683,
                "resource_uri": ""
            },
            "eas": {
                "resource_uri": "",
                "reference": "hg19",
                "barcodeKitName": "IonXpress"
            },
            "resource_uri": "/rundb/api/v1/monitorresult/304393/",
            "barcodeId": "IonXpress",
            "autoExempt": false,
            "representative": false
        }
    ]
}

Allowed HTTP methods

• get
• post
• put
• delete
• patch