Experimentanalysissettings Resource

Resource URL: http://mytorrentserver/rundb/api/v1/experimentanalysissettings/

Schema URL: http://mytorrentserver/rundb/api/v1/experimentanalysissettings/schema/

Fields table

field	help text	default	nullable	readonly	blank	unique	type
isEditable	Boolean data. Ex: True	false	false	false	true	false	boolean
hotSpotRegionBedFile	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
results	Many related resources. Can be either a list of URIs or list of individually nested resource data.	n/a	true	false	true	false	related
targetRegionBedFile	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
thumbnailalignmentargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
thumbnailanalysisargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
id	Integer data. Ex: 2673		false	false	true	true	integer
barcodedSamples	Unicode string data. Ex: “Hello World”	{}	true	false	false	false	string
reference	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
isOneTimeOverride	Boolean data. Ex: True	false	false	false	true	false	boolean
analysisargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
thumbnailcalibrateargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
realign	Boolean data. Ex: True	false	false	false	true	false	boolean
selectedPlugins	Unicode string data. Ex: “Hello World”	{}	true	false	false	false	string
experiment	A single related resource. Can be either a URI or set of nested resource data.	n/a	true	false	true	false	related
barcodeKitName	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
beadfindargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
threePrimeAdapter	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
thumbnailbasecallerargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
status	Unicode string data. Ex: “Hello World”		false	false	true	false	string
prebasecallerargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
prethumbnailbasecallerargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
alignmentargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
isDuplicateReads	Boolean data. Ex: True	false	false	false	true	false	boolean
libraryKey	Unicode string data. Ex: “Hello World”		false	false	true	false	string
date	A date & time as a string. Ex: “2010-11-10T03:07:43”	n/a	true	false	false	false	datetime
libraryKitName	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
thumbnailbeadfindargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
calibrateargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
tfKey	Unicode string data. Ex: “Hello World”		false	false	true	false	string
libraryKitBarcode	Unicode string data. Ex: “Hello World”	n/a	true	false	false	false	string
base_recalibrate	Boolean data. Ex: True	true	false	false	true	false	boolean
basecallerargs	Unicode string data. Ex: “Hello World”		false	false	true	false	string
resource_uri	Unicode string data. Ex: “Hello World”	n/a	false	true	false	false	string

Example request

Request URL: http://mytorrentserver/rundb/api/v1/experimentanalysissettings/?format=json&limit=1

Python example

import requests

ts_api_request = requests.get("http://mytorrentserver/rundb/api/v1/experimentanalysissettings/", params={"format": "json", "limit": 1})
ts_api_response = ts_api_request.json()

experimentanalysissettingss = ts_api_response["objects"]

for experimentanalysissettings in experimentanalysissettingss:
    print experimentanalysissettings

Torrent Server response

{
    "meta": {
        "previous": null,
        "total_count": 23666,
        "offset": 0,
        "limit": 1,
        "next": "/rundb/api/v1/experimentanalysissettings/?offset=1&limit=1&format=json"
    },
    "objects": [
        {
            "isEditable": true,
            "hotSpotRegionBedFile": "",
            "results": [],
            "targetRegionBedFile": "/results/uploads/BED/15/hg19/unmerged/detail/Ion-TargetSeq-Exome-50Mb-hg19.bed",
            "thumbnailalignmentargs": "",
            "thumbnailanalysisargs": "",
            "id": 138,
            "barcodedSamples": {},
            "reference": "hg19",
            "isOneTimeOverride": false,
            "analysisargs": "",
            "thumbnailcalibrateargs": "",
            "realign": false,
            "selectedPlugins": {
                "coverageAnalysis": {
                    "userInput": "",
                    "version": "3.4.47670",
                    "features": [],
                    "name": "coverageAnalysis",
                    "id": "319"
                }
            },
            "experiment": "/rundb/api/v1/experiment/6822/",
            "barcodeKitName": "",
            "beadfindargs": "",
            "threePrimeAdapter": "ATCACCGACTGCCCATAGAGAGGCTGAGAC",
            "thumbnailbasecallerargs": "",
            "status": "planned",
            "prebasecallerargs": "",
            "prethumbnailbasecallerargs": "",
            "alignmentargs": "",
            "isDuplicateReads": false,
            "libraryKey": "TCAG",
            "date": "2012-12-04T00:09:21.000461+00:00",
            "libraryKitName": "Ion Xpress Plus Fragment Library Kit",
            "thumbnailbeadfindargs": "",
            "calibrateargs": "",
            "tfKey": "",
            "libraryKitBarcode": null,
            "base_recalibrate": true,
            "basecallerargs": "",
            "resource_uri": "/rundb/api/v1/experimentanalysissettings/138/"
        }
    ]
}

Allowed HTTP methods

• get
• post
• put
• delete
• patch