Results Resource ========================================================================== Resource URL: ``http://mytorrentserver/rundb/api/v1/results/`` Schema URL: ``http://mytorrentserver/rundb/api/v1/results/schema/`` .. include:: ../manual_api_ref_docs/results.rst Fields table ------------ =================== ================================================================================================== ======= ======== ======== ===== ====== ======== field help text default nullable readonly blank unique type =================== ================================================================================================== ======= ======== ======== ===== ====== ======== **reference** Unicode string data. Ex: "Hello World" n/a true false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **processedflows** Integer data. Ex: 2673 n/a false false false false integer ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **reportStatus** Unicode string data. Ex: "Hello World" Nothing true false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **reportstorage** A single related resource. Can be either a URI or set of nested resource data. n/a false false false false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **analysisVersion** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **runid** Unicode string data. Ex: "Hello World" false false true false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **id** Integer data. Ex: 2673 false false true true integer ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **filesystempath** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **metaData** Unicode string data. Ex: "Hello World" {} false false true false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **log** Unicode string data. Ex: "Hello World" false false true false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **timeStamp** A date & time as a string. Ex: "2010-11-10T03:07:43" true false false true false datetime ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **libmetrics** Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a false false false false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **experiment** A single related resource. Can be either a URI or set of nested resource data. n/a true false false false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **resultsName** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **status** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **planShortID** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **processedCycles** Integer data. Ex: 2673 n/a false false false false integer ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **bamLink** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **sffLink** Unicode string data. Ex: "Hello World" n/a true false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **representative** Boolean data. Ex: True false false false true false boolean ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **pluginState** A dictionary of data. Ex: {'price': 26.73, 'name': 'Daniel'} n/a false true false false dict ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **qualitymetrics** Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a false false false false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **diskusage** Integer data. Ex: 2673 n/a true false false false integer ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **eas** A single related resource. Can be either a URI or set of nested resource data. n/a true false true false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **tfSffLink** Unicode string data. Ex: "Hello World" n/a true false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **projects** Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a false false false false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **pluginStore** A dictionary of data. Ex: {'price': 26.73, 'name': 'Daniel'} n/a false true false false dict ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **resultsType** Unicode string data. Ex: "Hello World" false false true false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **tfFastq** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **tfmetrics** Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a false false false false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **parentIDs** Unicode string data. Ex: "Hello World" false false true false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **analysismetrics** Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a false false false false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **timeToComplete** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **reportLink** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **fastqLink** Unicode string data. Ex: "Hello World" n/a false false false false string ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **pluginresults** Many related resources. Can be either a list of URIs or list of individually nested resource data. n/a false false false false related ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **framesProcessed** Integer data. Ex: 2673 n/a false false false false integer ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **autoExempt** Boolean data. Ex: True false false false true false boolean ------------------- -------------------------------------------------------------------------------------------------- ------- -------- -------- ----- ------ -------- **resource_uri** Unicode string data. Ex: "Hello World" n/a false true false false string =================== ================================================================================================== ======= ======== ======== ===== ====== ======== Example request --------------- Request URL: ``http://mytorrentserver/rundb/api/v1/results/?format=json&limit=1`` Python example ^^^^^^^^^^^^^^ .. code-block:: python import requests ts_api_request = requests.get("http://mytorrentserver/rundb/api/v1/results/", params={"format": "json", "limit": 1}) ts_api_response = ts_api_request.json() resultss = ts_api_response["objects"] for results in resultss: print results Torrent Server response ^^^^^^^^^^^^^^^^^^^^^^^ .. code-block:: javascript { "meta": { "previous": null, "total_count": 43354, "offset": 0, "limit": 1, "next": "/rundb/api/v1/results/?offset=1&limit=1&format=json" }, "objects": [ { "reference": "hg19", "processedflows": 0, "reportStatus": "Nothing", "reportstorage": { "name": "Home", "default": true, "webServerPath": "/output", "dirPath": "/results/analysis/output", "id": 1, "resource_uri": "" }, "analysisVersion": "db:4.1.21+2-1,an:4.1.24+0-1,", "runid": "DGMU8", "id": 293943, "filesystempath": "/results/analysis/output/Home/Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446_293943", "metaData": {}, "log": "/output/Home/Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446_293943/log.html", "timeStamp": "2014-01-23T07:39:52.000803+00:00", "libmetrics": [ "/rundb/api/v1/libmetrics/32368/" ], "experiment": "/rundb/api/v1/experiment/17446/", "resultsName": "Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446", "status": "Completed", "planShortID": "ONPK8", "processedCycles": 0, "bamLink": "/output/Home/Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446_293943/R_2014_01_22_16_30_23_user_D1--632--R54651-p8s2_827b2_20m_man-cf_Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446.bam", "sffLink": null, "representative": false, "pluginState": { "coverageAnalysisLite": "Completed", "SystematicErrorAnalysis": "Completed", "1_Torrent_Accuracy": "Error", "duplicateReads_useZC": "Completed", "autoCal": "Completed", "variantCaller": "Completed", "ConversionRate": "Completed", "validateVariantCaller": "Completed", "timingPerformance": "Completed", "coverageAnalysis": "Completed", "VariantQC": "Completed" }, "qualitymetrics": [ "/rundb/api/v1/qualitymetrics/31678/" ], "diskusage": 151, "eas": "/rundb/api/v1/experimentanalysissettings/18714/", "tfSffLink": null, "projects": [ "/rundb/api/v1/project/1080/" ], "pluginStore": { "coverageAnalysisLite": { "Non-duplicate": "", "barcoded": "true", "Uniquely mapped": "No", "Targetted regions": "/results/uploads/BED/46/hg19/merged/plain/AmpliSeqExome.20131001.designed.bed", "Target padding": "0", "barcodes": { "IonXpress_033": { "Bases in target regions": "57742646", "Number of mapped reads": "41517304", "Targeted Regions": "AmpliSeqExome.20131001.designed", "Percent reads on target": "94.39%", "Average base coverage depth": "112.4", "Reference (File)": "hg19", "Coverage Analysis Lite Report": "N/A", "Target base coverage at 100x": "51.05%", "Target base coverage at 20x": "94.26%", "Uniformity of base coverage": "93.56%", "Target base coverage at 1x": "98.53%", "Using": "All Mapped Reads", "Target base coverage at 500x": "0.10%", "Alignments": "IonXpress_033_R_2014_01_22_16_30_23_user_D1--632--R54651-p8s2_827b2_20m_man-cf_Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446", "Total base reads on target": "6490060189" }, "IonXpress_034": { "Bases in target regions": "57742646", "Number of mapped reads": "48026110", "Targeted Regions": "AmpliSeqExome.20131001.designed", "Percent reads on target": "94.01%", "Average base coverage depth": "130.8", "Reference (File)": "hg19", "Coverage Analysis Lite Report": "N/A", "Target base coverage at 100x": "61.01%", "Target base coverage at 20x": "94.93%", "Uniformity of base coverage": "93.55%", "Target base coverage at 1x": "98.55%", "Using": "All Mapped Reads", "Target base coverage at 500x": "0.22%", "Alignments": "IonXpress_034_R_2014_01_22_16_30_23_user_D1--632--R54651-p8s2_827b2_20m_man-cf_Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446", "Total base reads on target": "7552568443" } } }, "SystematicErrorAnalysis": { "qts_peak": "NaN", "indel-5-per-mb": "10626.700000000001", "positions-with-sse": "0.0080719999999999993", "qts_base": "NaN", "barcoded": "true", "positions-with-sse-d15": "0.0080719999999999993", "Target-regions_file": "/results/uploads/BED/46/hg19/merged/plain/AmpliSeqExome.20131001.designed.bed", "stb-95-per-mb": "67945.399999999994", "positions-with-sse-i5": "0.0073000000000000001", "positions-with-sse-d5": "0.023935000000000001", "positions-with-sse-i15": "0.0018799999999999999", "indel-15-per-mb": "3118.8000000000002", "barcodes": { "IonXpress_033": { "indel-5-per-mb": "10600.3", "positions-with-sse": "0.007770", "positions-with-sse-d15": "0.007770", "stb-95-per-mb": "68851.0", "positions-with-sse-i5": "0.007519", "positions-with-sse-d5": "0.022925", "positions-with-sse-i15": "0.001964", "indel-15-per-mb": "3126.1" }, "IonXpress_034": { "indel-5-per-mb": "10653.1", "positions-with-sse": "0.008373", "positions-with-sse-d15": "0.008373", "stb-95-per-mb": "67039.8", "positions-with-sse-i5": "0.007080", "positions-with-sse-d5": "0.024945", "positions-with-sse-i15": "0.001796", "indel-15-per-mb": "3111.5" } } }, "1_Torrent_Accuracy": {}, "duplicateReads_useZC": { "adapter_found_rate_chr1": "0.89400000000000002", "duplicate_reads_chr1": 673650, "duprate_at_725k_chr1": "0.89300000000000002", "duplicate_rate_chr1": "0.89200000000000002", "total_reads_chr1": 754826 }, "autoCal": { "dc_range": 0 }, "variantCaller": { "barcodes": { "IonXpress_033": { "hotspots": {}, "variants": { "no_call": 0, "homo_snps": 18047, "het_snps": 31409, "other": 1321, "variants": 54343, "het_indels": 2444, "homo_indels": 1122 } }, "IonXpress_034": { "hotspots": {}, "variants": { "no_call": 0, "homo_snps": 18134, "het_snps": 31524, "other": 1308, "variants": 54522, "het_indels": 2422, "homo_indels": 1134 } } }, "barcoded": "true", "targets_bed": "/results/uploads/BED/46/hg19/unmerged/detail/AmpliSeqExome.20131001.designed.bed", "Target Regions": "AmpliSeqExome.20131001.designed", "Trim Reads": true, "Target Loci": "Not using", "Configuration": "Germ Line - Proton - Low Stringency", "Aligned Reads": "R_2014_01_22_16_30_23_user_D1--632--R54651-p8s2_827b2_20m_man-cf", "Library Type": "AmpliSeq" }, "ConversionRate": {}, "validateVariantCaller": { "SNP_FP-ConfidentPos": 5410, "InDel_AmbPos-AllPos": 0, "SNP_PPV>=30x": "96.7228784857032", "InDel_FN>=100x": 930, "SNP_FN>=100x": 896, "InDel_TP-AllPos": 2591, "InDel_FP>=30x": 1689, "SNP_FN>=30x": 2004, "SNP_FP>=1000x": 0, "SNP_ConsensusAccuracy-AllPos": "0.999914181450164", "InDel_NoCalls-AllPos": 894775, "InDel_FP-AllPos": 2681, "InDel_FP_50x-100x": 695, "InDel_Sensitivity>=20x": "47.7212806026365", "SNP_TP>=500x": 132, "SNP_Sensitivity>=100x": "98.2144280589877", "SNP_Sensitivity>=500x": "99.2481203007519", "InDel_ConsensusAccuracy-AllPos": "0.999949885886992", "SNP_ConsensusAccuracy>=50x": "0.999971537775062", "InDel_FN>=20x": 2776, "SNP_FP>=50x": 1762, "InDel_PPV-AllPos": "49.1464339908953", "InDel_ConsensusAccuracy>=30x": "0.999964918459836", "InDel_FP-ncRNA": 18, "InDel_ReferenceCalls-AllPos": 0, "Target-regions_file": "/results/analysis/output/Home/Auto_user_D1--632--R54651-p8s2_827b2_20m_man-cf_17446_293943/plugin_out/validateVariantCaller_out.570190/../variantCaller_out.564691/AmpliSeqExome.20131001.designed.bed", "SNP_TP-AllPos": 87058, "InDel_Sensitivity>=30x": "49.0349819059107", "InDel_FN>=500x": 3, "InDel_FP_20x-50x": 827, "InDel_FP-ConfidentPos": 2681, "InDel_FN-AllPos": 3353, "SNP_HP11-AllPos": 0, "InDel_FN>=50x": 2041, "SNP_Sensitivity-AllPos": "94.6478076994162", "Truth-major_SNP_file": "NA12878_NIST_NoChrY_SNP.bed", "InDel_Sensitivity-AllAnnotations": "87.1800314804519", "SNP_FP_200x-300x": 84, "InDel_FP>=20x": 2020, "SNP_FN>=500x": 1, "Combined Variant Positive Predictive Value for All Bases at >=20x": "94.0001", "SNP_Sensitivity>=1000x": 100, "InDel_FP_700x-1000x": 0, "SNP_FP>=30x": 2777, "SNP_FP_700x-1000x": 0, "SNP_ConsensusAccuracy>=20x": "0.999952352557784", "InDel_TP>=30x": 2439, "SNP_AmbPos-AllPos": 0, "Truth-minor_InDel_file": "None", "SNP_FP_500x-700x": 1, "SNP_FP_50x-100x": 1095, "InDel_ConsensusAccuracy>=20x": "0.999960167834606", "InDel_FP-Exons": 1062, "SNP_TP>=30x": 81962, "SNP_ReferenceCalls-AllPos": 0, "InDel_FP_500x-700x": 1, "InDel_FP_200x-300x": 65, "barcoded": "true", "SNP_FP_20x-50x": 1773, "SNP_FP>=100x": 667, "SNP_Sensitivity>=20x": "97.4601197273262", "InDel_FP_300x-400x": 9, "SNP_FP_100x-200x": 565, "barcodes": { "IonXpress_033": { "SNP_FP-ConfidentPos": "2733", "InDel_AmbPos-AllPos": "0", "SNP_PPV>=30x": "96.7970258096804", "InDel_FN>=100x": "411", "SNP_FN>=100x": "406", "InDel_TP-AllPos": "1281", "InDel_FP>=30x": "838", "SNP_FN>=30x": "1006", "SNP_FP>=1000x": "0", "SNP_ConsensusAccuracy-AllPos": "0.999912578529413", "InDel_NoCalls-AllPos": "450359", "InDel_FP-AllPos": "1375", "InDel_FP_50x-100x": "369", "InDel_Sensitivity>=20x": "47.4402730375427", "SNP_TP>=500x": "44", "SNP_Sensitivity>=100x": "98.2229614391386", "SNP_Sensitivity>=500x": "100", "InDel_ConsensusAccuracy-AllPos": "0.999949088579261", "SNP_ConsensusAccuracy>=50x": "0.999972775263102", "InDel_FN>=20x": "1386", "SNP_FP>=50x": "829", "InDel_PPV-AllPos": "48.230421686747", "InDel_ConsensusAccuracy>=30x": "0.99996518422908", "InDel_FP-ncRNA": "9", "InDel_ReferenceCalls-AllPos": "0", "SNP_TP-AllPos": "43461", "InDel_Sensitivity>=30x": "48.7158581328985", "InDel_FN>=500x": "1", "InDel_FP_20x-50x": "437", "InDel_FP-ConfidentPos": "1375", "InDel_FN-AllPos": "1690", "SNP_HP11-AllPos": "0", "InDel_FN>=50x": "977", "SNP_Sensitivity-AllPos": "94.4989237024635", "InDel_Sensitivity-AllAnnotations": "43.1167956916863", "SNP_FP_200x-300x": "34", "InDel_FP>=20x": "1013", "SNP_FN>=500x": "0", "Combined Variant Positive Predictive Value for All Bases at >=20x": "94.022600", "SNP_Sensitivity>=1000x": "0", "InDel_FP_700x-1000x": "0", "SNP_FP>=30x": "1344", "SNP_FP_700x-1000x": "0", "SNP_ConsensusAccuracy>=20x": "0.999952742906361", "InDel_TP>=30x": "1195", "SNP_AmbPos-AllPos": "0", "SNP_FP_500x-700x": "0", "SNP_FP_50x-100x": "536", "InDel_ConsensusAccuracy>=20x": "0.999960151224028", "InDel_FP-Exons": "537", "SNP_TP>=30x": "40617", "SNP_ReferenceCalls-AllPos": "0", "InDel_FP_500x-700x": "0", "InDel_FP_200x-300x": "29", "SNP_FP_20x-50x": "911", "SNP_FP>=100x": "293", "SNP_Sensitivity>=20x": "97.439640391121", "InDel_FP_300x-400x": "0", "SNP_FP_100x-200x": "255", "SNP_Sensitivity-AllAnnotations": "94.4989237024635", "InDel_FP_400x-500x": "2", "InDel_FP>=50x": "576", "SNP_FN-AllAnnotations": "2530", "SNP_FP-AllPos": "2733", "SNP_PPV-AllPos": "94.0836472269126", "SNP_FP>=20x": "1740", "InDel_Sensitivity>=1000x": "0", "InDel_ConsensusAccuracy>=50x": "0.999974203772787", "InDel_TP>=100x": "616", "SNP_TP>=50x": "36440", "SNP_ConsensusAccuracy>=30x": "0.999960965142337", "InDel_Sensitivity-AllPos": "43.1167956916863", "InDel_TP>=20x": "1251", "InDel_AmbNotDetected-AllPos": "0", "SNP_FP>=500x": "0", "% Callable Bases": "99.161500", "SNP_FN>=20x": "1105", "InDel_FP>=1000x": "0", "SNP_Sensitivity>=30x": "97.5830670542729", "InDel_FN>=1000x": "0", "InDel_FP>=500x": "0", "SNP_FP_400x-500x": "2", "InDel_HP11-AllPos": "0", "Combined Variant Positive Predictive Value for All Bases at all coverages": "91.590500", "SNP_FN>=1000x": "0", "SNP_FN>=50x": "810", "InDel_TP>=500x": "2", "InDel_PPV>=30x": "58.780127889818", "InDel_TP>=1000x": "0", "SNP_FP_300x-400x": "2", "SNP_Sensitivity>=50x": "97.8255033557047", "Combined Variant Sensitivity for All Bases at >= 20x": "94.560500", "SNP_TP>=100x": "22441", "InDel_FP>=100x": "207", "SNP_NoCalls-AllPos": "56910", "InDel_Sensitivity>=500x": "66.6666666666667", "SNP_TP>=20x": "42053", "InDel_Sensitivity>=50x": "52.3182040019522", "InDel_FN-AllAnnotations": "1690", "InDel_TP>=50x": "1072", "SNP_TP>=1000x": "0", "InDel_FN>=30x": "1258", "SNP_AmbNotDetected-AllPos": "0", "SNP_FP-ncRNA": "28", "SNP_FN-AllPos": "2530", "InDel_Sensitivity>=100x": "59.9805258033106", "InDel_FP_100x-200x": "176", "SNP_FP-Exons": "993", "Combined Variant Sensitivity for All Bases at all coverages": "91.381000" }, "IonXpress_034": { "SNP_FP-ConfidentPos": "2677", "InDel_AmbPos-AllPos": "0", "SNP_PPV>=30x": "96.6501472719622", "InDel_FN>=100x": "519", "SNP_FN>=100x": "490", "InDel_TP-AllPos": "1310", "InDel_FP>=30x": "851", "SNP_FN>=30x": "998", "SNP_FP>=1000x": "0", "SNP_ConsensusAccuracy-AllPos": "0.999915784370915", "InDel_NoCalls-AllPos": "444416", "InDel_FP-AllPos": "1306", "InDel_FP_50x-100x": "326", "InDel_Sensitivity>=20x": "47.9985035540591", "SNP_TP>=500x": "88", "SNP_Sensitivity>=100x": "98.2072952109172", "SNP_Sensitivity>=500x": "98.876404494382", "InDel_ConsensusAccuracy-AllPos": "0.999950683194723", "SNP_ConsensusAccuracy>=50x": "0.999970300287021", "InDel_FN>=20x": "1390", "SNP_FP>=50x": "933", "InDel_PPV-AllPos": "50.0764525993884", "InDel_ConsensusAccuracy>=30x": "0.999964652690593", "InDel_FP-ncRNA": "9", "InDel_ReferenceCalls-AllPos": "0", "SNP_TP-AllPos": "43597", "InDel_Sensitivity>=30x": "49.3454978183261", "InDel_FN>=500x": "2", "InDel_FP_20x-50x": "390", "InDel_FP-ConfidentPos": "1306", "InDel_FN-AllPos": "1663", "SNP_HP11-AllPos": "0", "InDel_FN>=50x": "1064", "SNP_Sensitivity-AllPos": "94.7966949336812", "InDel_Sensitivity-AllAnnotations": "44.0632357887656", "SNP_FP_200x-300x": "50", "InDel_FP>=20x": "1007", "SNP_FN>=500x": "1", "Combined Variant Positive Predictive Value for All Bases at >=20x": "93.977600", "SNP_Sensitivity>=1000x": "100", "InDel_FP_700x-1000x": "0", "SNP_FP>=30x": "1433", "SNP_FP_700x-1000x": "0", "SNP_ConsensusAccuracy>=20x": "0.999951962209208", "InDel_TP>=30x": "1244", "SNP_AmbPos-AllPos": "0", "SNP_FP_500x-700x": "1", "SNP_FP_50x-100x": "559", 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