Obsoletereferencegenome Resource

Resource URL: http://mytorrentserver/rundb/api/v1/obsoletereferencegenome/

Schema URL: http://mytorrentserver/rundb/api/v1/obsoletereferencegenome/schema/

Fields table

field help text default nullable readonly blank unique type
status Unicode string data. Ex: “Hello World”   false false true false string
reference_path Unicode string data. Ex: “Hello World”   false false true false string
name Unicode string data. Ex: “Hello World” n/a false false false false string
short_name Unicode string data. Ex: “Hello World” n/a false false false false string
index_version Unicode string data. Ex: “Hello World”   false false true false string
notes Unicode string data. Ex: “Hello World”   false false true false string
enabled Boolean data. Ex: True true false false true false boolean
species Unicode string data. Ex: “Hello World”   false false true false string
identity_hash Unicode string data. Ex: “Hello World” None true false false false string
source Unicode string data. Ex: “Hello World”   false false true false string
version Unicode string data. Ex: “Hello World”   false false true false string
celery_task_id Unicode string data. Ex: “Hello World”   false false true false string
date A date & time as a string. Ex: “2010-11-10T03:07:43” 2014-01-30T23:41:30.000557+00:00 false false false false datetime
verbose_error Unicode string data. Ex: “Hello World”   false false true false string
id Integer data. Ex: 2673   false false true true integer
resource_uri Unicode string data. Ex: “Hello World” n/a false true false false string

Example request

Request URL: http://mytorrentserver/rundb/api/v1/obsoletereferencegenome/?format=json&limit=1

Python example

import requests

ts_api_request = requests.get("http://mytorrentserver/rundb/api/v1/obsoletereferencegenome/", params={"format": "json", "limit": 1})
ts_api_response = ts_api_request.json()

obsoletereferencegenomes = ts_api_response["objects"]

for obsoletereferencegenome in obsoletereferencegenomes:
    print obsoletereferencegenome

Torrent Server response

{
    "meta": {
        "previous": null,
        "total_count": 74,
        "offset": 0,
        "limit": 1,
        "next": "/rundb/api/v1/obsoletereferencegenome/?offset=1&limit=1&format=json"
    },
    "objects": [
        {
            "status": "error",
            "reference_path": "/results/referenceLibrary/tmap-f2/ampl_400HSMver1",
            "name": "ampl_400HSMver1",
            "short_name": "ampl_400HSMver1",
            "index_version": "tmap-f2",
            "notes": "",
            "enabled": true,
            "species": "",
            "identity_hash": null,
            "source": "",
            "version": "hg19",
            "celery_task_id": "",
            "date": "2011-08-11T21:24:22.000733+00:00",
            "verbose_error": "[\"\", \"/usr/local/bin/build_genome_index.pl: input file /results/referenceLibrary/tmap-f2/ampl_400HSMver1/ampl_400HSMver1.fasta does not exist\\n\", 2]",
            "id": 183,
            "resource_uri": "/rundb/api/v1/obsoletereferencegenome/183/"
        }
    ]
}

Allowed HTTP methods

  • get
  • post
  • put
  • delete
  • patch

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