Database Table rundb_experimentanalysissettings ============================================================================ Postgres database: ``iondb`` Postgres table: ``rundb_experimentanalysissettings`` .. include:: ../manual_database_ref_docs/rundb_experimentanalysissettings.rst Schema ------- +------------------------------+----------------------------------+---------------------------------------------------------+ | Field | Type | Description | +==============================+==================================+=========================================================+ | alignmentargs | String (up to 5000) | Alignment args | +------------------------------+----------------------------------+---------------------------------------------------------+ | analysisargs | String (up to 5000) | Analysis args | +------------------------------+----------------------------------+---------------------------------------------------------+ | barcodeKitName | String (up to 128) | barcodeKitName | +------------------------------+----------------------------------+---------------------------------------------------------+ | barcodedSamples | Text | barcodedSamples | +------------------------------+----------------------------------+---------------------------------------------------------+ | basecallerargs | String (up to 5000) | Basecaller args | +------------------------------+----------------------------------+---------------------------------------------------------+ | beadfindargs | String (up to 5000) | Beadfind args | +------------------------------+----------------------------------+---------------------------------------------------------+ | date | Date (with time) | date | +------------------------------+----------------------------------+---------------------------------------------------------+ | experiment | Experiment (ForeignKey) | the related rundb.Experiment row | +------------------------------+----------------------------------+---------------------------------------------------------+ | hotSpotRegionBedFile | String (up to 1024) | hotSpotRegionBedFile | +------------------------------+----------------------------------+---------------------------------------------------------+ | id | Integer | ID | +------------------------------+----------------------------------+---------------------------------------------------------+ | isDuplicateReads | Boolean (Either True or False) | isDuplicateReads | +------------------------------+----------------------------------+---------------------------------------------------------+ | isEditable | Boolean (Either True or False) | isEditable | +------------------------------+----------------------------------+---------------------------------------------------------+ | isOneTimeOverride | Boolean (Either True or False) | isOneTimeOverride | +------------------------------+----------------------------------+---------------------------------------------------------+ | libraryKey | String (up to 64) | libraryKey | +------------------------------+----------------------------------+---------------------------------------------------------+ | libraryKitBarcode | String (up to 512) | libraryKitBarcode | +------------------------------+----------------------------------+---------------------------------------------------------+ | libraryKitName | String (up to 512) | libraryKitName | +------------------------------+----------------------------------+---------------------------------------------------------+ | prebasecallerargs | String (up to 5000) | Pre Basecaller args, used for recalibration | +------------------------------+----------------------------------+---------------------------------------------------------+ | prethumbnailbasecallerargs | String (up to 5000) | Thumbnail Pre Basecaller args, used for recalibration | +------------------------------+----------------------------------+---------------------------------------------------------+ | reference | String (up to 512) | reference | +------------------------------+----------------------------------+---------------------------------------------------------+ | selectedPlugins | Text | selectedPlugins | +------------------------------+----------------------------------+---------------------------------------------------------+ | status | String (up to 512) | status | +------------------------------+----------------------------------+---------------------------------------------------------+ | targetRegionBedFile | String (up to 1024) | targetRegionBedFile | +------------------------------+----------------------------------+---------------------------------------------------------+ | tfKey | String (up to 64) | tfKey | +------------------------------+----------------------------------+---------------------------------------------------------+ | threePrimeAdapter | String (up to 512) | 3' adapter | +------------------------------+----------------------------------+---------------------------------------------------------+ | thumbnailalignmentargs | String (up to 5000) | Thumbnail Alignment args | +------------------------------+----------------------------------+---------------------------------------------------------+ | thumbnailanalysisargs | String (up to 5000) | Thumbnail Analysis args | +------------------------------+----------------------------------+---------------------------------------------------------+ | thumbnailbasecallerargs | String (up to 5000) | Thumbnail Basecaller args | +------------------------------+----------------------------------+---------------------------------------------------------+ | thumbnailbeadfindargs | String (up to 5000) | Thumbnail Beadfind args | +------------------------------+----------------------------------+---------------------------------------------------------+